portage-ng --merge
>>> Emerging : portage://sci-biology/augustus-3.5.0:run?{[]}
These are the packages that would be merged, in order:
Calculating dependencies... done!
└─step 1─┤ download portage://app-arch/lz4-1.10.0-r1
│ └─ file ─┤ 378.04 Kb lz4-1.10.0.tar.gz
│ download portage://dev-build/b2-5.5.3
│ └─ file ─┤ 1.17 Mb b2-5.5.3.tar.gz
│ download portage://dev-db/mysql++-3.3.0
│ └─ file ─┤ 4.42 Mb mysql++-3.3.0.tar.gz
│ download portage://dev-db/mysql-connector-c-8.0.41-r1
│ └─ file ─┤ 466.11 Mb mysql-boost-8.0.41.tar.gz
│ download portage://dev-libs/boost-1.91.0-r2
│ └─ file ─┤ 195.10 Mb boost_1_91_0.tar.bz2
│ download portage://sci-biology/augustus-3.5.0
│ └─ file ─┤ 215.45 Mb augustus-3.5.0.tar.gz
│ download portage://sci-biology/bamtools-2.5.3
│ └─ file ─┤ 239.89 Kb bamtools-2.5.3.tar.gz
│ download portage://sci-biology/samtools-1.23.1
│ └─ file ─┤ 9.03 Mb samtools-1.23.1.tar.bz2
│ download portage://sci-libs/amd-3.3.4-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/blas-lapack-aux-wrapper-6
│ └─ file ─┤ 9.31 Kb blas-lapack-aux-wrapper-6.tar.xz
│ download portage://sci-libs/btf-2.3.3-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/camd-3.3.5-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/ccolamd-3.3.5-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/cholmod-5.3.4-r2
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/colamd-3.3.5-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/cxsparse-4.4.2-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/flexiblas-3.5.0
│ └─ file ─┤ 78.85 Mb flexiblas-release-v3.5.0.tar.bz2
│ download portage://sci-libs/gsl-2.7.1-r3
│ └─ file ─┤ 11.79 Kb gsl-2.7-cblas.patch.bz2
│ │ 7.16 Mb gsl-2.7.1.tar.gz
│ download portage://sci-libs/htslib-1.23.1
│ └─ file ─┤ 4.76 Mb htslib-1.23.1.tar.bz2
│ download portage://sci-libs/klu-2.3.6-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/lapack-3.12.1-r2
│ └─ file ─┤ 7.69 Mb lapack-3.12.1.tar.gz
│ download portage://sci-libs/ldl-3.3.3-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/openblas-0.3.34
│ └─ file ─┤ 24.15 Mb OpenBLAS-0.3.34.tar.gz
│ download portage://sci-libs/spqr-4.3.6-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/suitesparse-7.12.2
│ download portage://sci-libs/suitesparseconfig-7.12.2-r2
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-libs/umfpack-6.3.7-r1
│ └─ file ─┤ 90.92 Mb SuiteSparse-7.12.2.gh.tar.gz
│ download portage://sci-mathematics/lpsolve-5.5.2.14
│ └─ file ─┤ 552.39 Kb lpsolve-5.5.2.14.tar.gz
└─step 2─┤ install portage://sci-libs/htslib-1.23.1
│ └─ conf ─┤ USE = "bzip2 lzma -curl"
│ │ SLOT = "0/3"
│ install portage://app-arch/lz4-1.10.0-r1
│ └─ conf ─┤ USE = "-static-libs -test"
│ │ SLOT = "0/1.10.0-meson"
│ install portage://sci-biology/bamtools-2.5.3
│ └─ conf ─┤ SLOT = "0/2.5.3"
│ install portage://sci-libs/gsl-2.7.1-r3
│ └─ conf ─┤ USE = "deprecated -cblas-external -static-libs"
│ │ SLOT = "0/27"
│ install portage://sci-libs/suitesparse-7.12.2
│ └─ conf ─┤ USE = "openmp -cuda -doc -partition"
│ install portage://sci-mathematics/lpsolve-5.5.2.14
│ └─ conf ─┤ SLOT = "0/55"
│ install portage://virtual/fortran-0-r1
│ └─ conf ─┤ USE = "openmp"
└─step 3─┤ install portage://dev-build/b2-5.5.3
│ └─ conf ─┤ USE = "-examples"
│ run portage://sci-libs/htslib-1.23.1
│ run portage://app-arch/lz4-1.10.0-r1
│ run portage://sci-biology/bamtools-2.5.3
│ run portage://sci-libs/gsl-2.7.1-r3
│ run portage://sci-mathematics/lpsolve-5.5.2.14
│ run portage://virtual/fortran-0-r1
└─step 4─┤ install portage://sci-libs/lapack-3.12.1-r2 (blocked: soft by sci-libs/blas-lapack-aux-wrapper)
│ └─ conf ─┤ USE = "deprecated flexiblas lapacke -doc -eselect-ldso -index64 -test"
│ install portage://dev-db/mysql-connector-c-8.0.41-r1
│ └─ conf ─┤ USE = "-ldap -static-libs"
│ │ SLOT = "0/21"
│ install portage://dev-libs/boost-1.91.0-r2
│ └─ conf ─┤ USE = "bzip2 nls python* zlib context stacktrace -debug -doc -icu -lzma -mpi -numpy -test -test-full -tools -zstd"
│ │ PYTHON_TARGETS = "python3_14 -python3_12 -python3_13"
│ │ SLOT = "0/1.91.0"
│ install portage://sci-biology/samtools-1.23.1
│ install portage://sci-libs/openblas-0.3.34
│ └─ conf ─┤ USE = "openmp -cpudetection -index64 -pthread -relapack -test"
└─step 5─┤ run portage://dev-db/mysql-connector-c-8.0.41-r1
│ run portage://sci-libs/lapack-3.12.1-r2 (blocked: soft by sci-libs/blas-lapack-aux-wrapper)
│ run portage://dev-libs/boost-1.91.0-r2
│ run portage://sci-biology/samtools-1.23.1
│ run portage://sci-libs/openblas-0.3.34
└─step 6─┤ install portage://sci-libs/flexiblas-3.5.0
│ └─ conf ─┤ USE = "openmp openblas system-blas (-blis) (-mkl) -index64 -tbb -test"
│ install portage://dev-db/mysql++-3.3.0
│ └─ conf ─┤ USE = "-doc"
│ │ SLOT = "0/3"
└─step 7─┤ run portage://sci-libs/flexiblas-3.5.0
│ run portage://dev-db/mysql++-3.3.0
└─step 8─┤ install portage://sci-libs/blas-lapack-aux-wrapper-6
│ └─ conf ─┤ USE = "-index64 -test"
└─step 9─┤ run portage://sci-libs/blas-lapack-aux-wrapper-6
└─step 10─┤ install portage://virtual/blas-3.8-r1
│ └─ conf ─┤ USE = "flexiblas -eselect-ldso -index64"
│ install portage://virtual/lapack-3.10-r1
│ └─ conf ─┤ USE = "flexiblas -eselect-ldso -index64"
└─step 11─┤ run portage://virtual/blas-3.8-r1
│ run portage://virtual/lapack-3.10-r1
└─step 12─┤ install portage://sci-libs/suitesparseconfig-7.12.2-r2
│ └─ conf ─┤ USE = "openmp -cuda"
│ │ SLOT = "0/7"
└─step 13─┤ run portage://sci-libs/suitesparseconfig-7.12.2-r2
└─step 14─┤ install portage://sci-libs/amd-3.3.4-r1
│ └─ conf ─┤ USE = "-doc -fortran -test"
│ │ SLOT = "0/3"
│ install portage://sci-libs/btf-2.3.3-r1
│ └─ conf ─┤ SLOT = "0/2"
│ install portage://sci-libs/camd-3.3.5-r1
│ └─ conf ─┤ USE = "-doc -test"
│ │ SLOT = "0/3"
│ install portage://sci-libs/ccolamd-3.3.5-r1
│ └─ conf ─┤ USE = "-test"
│ │ SLOT = "0/3"
│ install portage://sci-libs/colamd-3.3.5-r1
│ └─ conf ─┤ USE = "-test"
│ │ SLOT = "0/3"
│ install portage://sci-libs/cxsparse-4.4.2-r1
│ └─ conf ─┤ USE = "-test"
│ │ SLOT = "0/4"
└─step 15─┤ run portage://sci-libs/amd-3.3.4-r1
│ run portage://sci-libs/btf-2.3.3-r1
│ run portage://sci-libs/camd-3.3.5-r1
│ run portage://sci-libs/ccolamd-3.3.5-r1
│ run portage://sci-libs/colamd-3.3.5-r1
│ run portage://sci-libs/cxsparse-4.4.2-r1
└─step 16─┤ install portage://sci-libs/ldl-3.3.3-r1
│ └─ conf ─┤ USE = "-doc -test"
│ │ SLOT = "0/3"
└─step 17─┤ install portage://sci-libs/cholmod-5.3.4-r2
│ └─ conf ─┤ USE = "openmp cholesky matrixops modify partition supernodal -cuda -doc -test"
│ │ SLOT = "0/5"
│ run portage://sci-libs/ldl-3.3.3-r1
└─step 18─┤ run portage://sci-libs/cholmod-5.3.4-r2
└─step 19─┤ install portage://sci-libs/klu-2.3.6-r1
│ └─ conf ─┤ USE = "-doc -test"
│ │ SLOT = "0/2"
│ install portage://sci-libs/spqr-4.3.6-r1
│ └─ conf ─┤ USE = "-cuda -doc -test"
│ │ SLOT = "0/4"
│ install portage://sci-libs/umfpack-6.3.7-r1
│ └─ conf ─┤ USE = "openmp -doc -test"
│ │ SLOT = "0/6"
└─step 20─┤ run portage://sci-libs/klu-2.3.6-r1
│ run portage://sci-libs/spqr-4.3.6-r1
│ run portage://sci-libs/umfpack-6.3.7-r1
└─step 21─┤ run portage://sci-libs/suitesparse-7.12.2
└─step 22─┤ install portage://sci-biology/augustus-3.5.0
│ └─ conf ─┤ USE = "-doc -test"
└─step 23─┤ run portage://sci-biology/augustus-3.5.0
Total: 89 actions (28 downloads, 31 installs, 30 runs), grouped into 23 steps.
2.06 Gb to be downloaded.
>>> Blockers added during proving & planning:
[blocks B] !sci-libs/lapack (soft blocker, phase: install, required by: portage://sci-libs/blas-lapack-aux-wrapper-6)
[blocks B] !sci-libs/lapack (soft blocker, phase: run, required by: portage://sci-libs/blas-lapack-aux-wrapper-6)
[blocks B] !sci-libs/lapack (soft blocker, phase: run, required by: portage://sci-libs/flexiblas-3.5.0)